EM reconstruction of an aCC motor neuron (white) and all presynaptic arbors (reds/blues). Data from 'Quantitative neuroanatomy for connectomics in Drosophila"
Significant Contributions
Turner NL, Macrina T, Bae JA, Yang R, Wilson AM, Schneider-Mizell C, Lee K, Lu R, Wu J, Bodor AL, Bleckert AA, Brittain D, Froudarakis E, Dorkenwald S, Collman F, Kemnitz N, Ih D, Silversmith WM, Zung J, Zlateski A, Tartavull I, Yu SC, Popovych S, Mu S, Wong W, Jordan CS, Castro M, Buchanan J, Bumbarger DJ, Takeno M, Torres R, Mahalingam G, Elabbady L, Li Y, Cobos E, Zhou P, Suckow S, Becker L, Paninski L, Polleux F, Reimer J, Tolias AS, Reid RC, da Costa NM, Seung HS. Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity. Cell. 2022 Feb 23 [journal][biorxiv] .
Schneider-Mizell CM, Bodor A, Collman F, Brittan D, Bleckert A, Dorkenwald S, Turner N, Macrina T, Lee K, Lu R, Wu J, Zhuang J, Nandi A, Hu B, Buchanan J, Takeno M, Torres R, Mahalingam G, Bumbarger D, Li Y, Chartrand T, Kemnitz K, Silversmith W, Ih D, Zung J, Zlateski A, Tartavull I, Popovych S, Wong W, Castro M, Jordan C, Froudarakis E, Becker L, Such S, Reimer J, Tolias AS, Anastassiou C, Seung HS, Reid RC, da Costa NM. Structure and function of axo-axonic inhibition. eLife 2021 [journal]
MICrONs Consortium. Functional connectomics spanning multiple areas of mouse visual cortex. [biorxiv] (Although really, just go look at the data itself at Microns Explorer)
Gerhard S, Andrade I, Fetter RD, Cardona A, Schneider-Mizell CM. Conserved neural circuit structure across Drosophila larval development revealed by comparative connectomics. eLife, 2017. [journal][biorxiv]
Eichler K, Litwin-Kumar A, Li F, Park Y, Andrade I, Schneider-Mizell CM, Saumweber T, Huser A, Eschbach C, Gerber B, Fetter RD, Truman JW, Priebe CE, Abbott LF, Thum AS, Zlatic M, Cardona A. The Complete Connectome Of A Learning And Memory Center In An Insect Brain. Nature, 2017. [journal] [biorxiv]
Jovanic T (co-first), Schneider-Mizell CM (co-first), Shao M, Masson J-B, Denisov G, Fetter RD, Mensh BD, Truman JW, Cardona A. Zlatic M. Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila. Cell, 2016. [journal] [pdf]
Schneider-Mizell CM (co-first), Gerhard S (co-first), Longair M, Kazimiers T, Li F, Zwart MF, Champion A, Midgley F, Fetter R, Saalfeld S, Cardona A. Quantitative neuroanatomy for connectomics in Drosophila. eLife, 2016. [bioarxiv] [journal] [pdf]
Ohyama T (co-first), Schneider-Mizell CM (co-first), Fetter RD, Aleman JV, Franconville R, Rivera-Alba M, Mensh BD, Branson KM1, Simpson JH, Truman JW, Cardona A, Zlatic M. A multilevel multimodal circuit enhances action selection in Drosophila. Nature, 2015. [journal] [pdf]
Schneider-Mizell CM, Parent JM, Ben-Jacob E, Zochowski MR, Sander LM. From network structure to network reorganization: implications for adult neurogenesis. Physical Biology, 2010. [journal]
Schneider-Mizell CM, Sander LM. A generalized voter model on complex networks. Journal of Statistical Physics, 2009. [journal] [arxiv]
Modest Contributions
Macrina T, Lee K, Lu R, Turner N, Wu J, Popyvich S, Silversmith, Kemnitz N, Bae J, Castro M, Dorkenwald S, Halageri A, Jia Z, Jordan C, Li K, Mitchell E, Mondal SS, Mu S, Nehoran B, Wong W, Yu S, Bodor A, Brittain D, Buchanan J, Bumbarger D, Cobos E, Collman F, Elabbady L, Fahey P, Froudarakis E, Kapner D, Kinn S, Mahalingam G, Papadopoulos S, Patel S, Schneider-Mizell CM, Sinz F, Takeno M, Torres R, Yin W, Pitkow X, Reimer J, Tolias AS, Reid RC, da Costa NM, Seung HS. Petascale neural circuit reconstruction: automated methods. [biorxiv]
Buchanan J, Elabbady L, Collman F, Jorstad N, Bakken T, Ott C, Glatzer J, Bleckert A, Bodor A, Brittain D, Bumbarger D, Mahalingam G, Seshamani S, Schneider-Mizell CM, Takeno M, Torres R, Yin W, Hodge R, Castro M, Dorkenwald S, Ih D, Jordan C, Kemnitz N, Lee K, Lu R, Macrina T, Mu S, Popovych S, Silversmith W, Tartavull I, Turner N, Wilson A, Wong W, Wu J, Zlateski A,Zung J, Lippincott-Schwartz J, Lein E, Seung HS, Berges DE, Reid RC, da Costa NM. Oligodendrocyte precursor cells prune axons in the mouse neocortex. [biorxiv]
Seshamani S, Elabbady L, Schneider-Mizell CM, Mahalingam G, Dorkenwald S, Bodor A, Macrina T, Bumbarger D, Buchanan J, Takeno M, Yin W, Brittain D, Torres R, Kapner D, Lu R, Wu J, da Costa NM, Reid RC, Collman F. Automated shape analysis from electron microscopy. [arxiv]
Dorkenwald S, McKeller C, Macrina T, Kemnitz N, Lee K, Ran L, Wu J, Popovych S, Mitchell E, Nehoran B, Jia Z, Bae J, Mu S, Ih D, Castro M, Ogedengbe O, Halageri A, Ashwood Z, Zung J, Brittain D, Collman F, Schneider-Mizell CM, Jordan C, Silversmith W, Baker C, Deutsch D, Encarnacion-Rivera L, Kumar S, Burke A, Gager J, Hebditch J, Koolman S, Moor M, Morejohn S, Silverman B, Willie K, Willie R, Yu S, Murthy M, Seung HS. FlyWire: Online community for whole-brain connectomics. Nature Methods, in press. [biorxiv]
Dorkenwald S, Turner N, Macrina T, Lee K, Lu R, Wu J, Bodor A, Beckert A, Brittain D, Kemnitz N, Silversmith W, Ih D, Zung J, Zlateski A, Tartavull I, Yu S, Popovych S, Wong W, Castro M, Jordan C, Wilson AM, Froudarakis E, Buchanan J, Takeno M, Torres R, Mahalingam G, Collman F, Schneider-Mizell CM, Bumbarger D, Li Y, Becker L, Suchow S, Reimer J, Tolias AS, da Costa NM, Reid CM, Seung HS. Binary and analog variation of synapses between cortical pyramidal neurons. [biorxiv]
Eschbach C, Fushiki A, Winding M, Schneider-Mizell CM, Shao M, Arruda R, Eichler K, Valdes-Aleman J, Ohyama T, Thum AS, Gerber B, Fetter RD, Truman JW, Litwin-Kumar A, Cardona A, Zlatic M. Recurrent architecture for adaptive regulation of learning in the insect brain. Nature Neuroscience, 2020. [biorxiv]
Miroschnikow A. Schlegel P, Schoofs A, Hueckesfeld S, Li F, Schneider-Mizell CM, Fetter RD, Truman J, Cardona A, and Pankratz M. The Feeding Connectome: Convergence of Monosynaptic and Polysynaptic Sensory Paths onto Common Motor Outputs. eLife, 2018 [journal][biorxiv]
Larderet I, Fritsch P, Gendre N, Maier L, Fetter RD, Schneider-Mizell CM, Truman JW, Zlatic M, Cardona A, Sprecher S. Organization Of The Drosophila Larval Visual Circuit. eLife, 2017 [journal][biorxiv].
Heckscher ES, Zarin AA, Faumont S, Clark MQ, Manning L, Fushiki A, Schneider-Mizell CM, Fetter RD, Truman JW, Zwart MF, Landgraf M, Cardona A, Lockery SR, Doe CQ. Even-Skipped+ Interneurons Are Core Components of a Sensorimotor Circuit that Maintains Left-Right Symmetric Muscle Contraction Amplitude. Neuron, 2015. [journal]
Khain E, Schneider-Mizell CM, Nowicki MO, Chiocca EA, Lawler SE, Sander LM. Pattern formation of glioma cells: effects of adhesion. Europhysics Letters, 2009. [journal] [arxiv]
Page S, Sander LM, Schneider-Mizell CM. Conformity and dissonance in generalized voter models. Journal of Statistical Physics, 2007. [journal]
Khain E, Sander LM, Schneider-Mizell CM. The role of cell-cell adhesion in wound healing. Journal of Statistical Physics, 2007. [journal] [arxiv]